Spatial#

Spatial Analyses#

This library stores code for analyzing lineage-tracing data from spatial genomics approaches. While some relevant code is stored elsewhere (e.g., the Spatial Simulators) we have specific functions here.

sp.impute_alleles_from_spatial_data(...[, ...])

Imputes data based on spatial location.

sp.get_spatial_graph_from_anndata(adata[, ...])

Get a spatial graph structure from an spatial anndata